In the Book of Jonah, all these creatures were obedient to God. The only creature who was not obedient was the rational Jonah whom God had granted free will by which he could disobey Him!
It is true that frequently man misuses his intellect and his freedom. Many a time does man trust in his own wisdom so much that it conflicts with God's will. Accordingly, the Holy Bible says: "And lean not on your own understanding" (Prov. 3:5) and gives the reason by the maxim which is mentioned twice in the Book of Proverbs: "There is a way that seems right to a man, but its end is the way of death" (Prov. 14:12 & 16:25). Man is always self-elated over his own discretion and prudence. This is why the Holy Bible says: "Every way of a man is right in his own eyes" (Prov. 21:2). Even so is the foolish (Prov. 12:15). Such is man. As for other creatures they know nothing but obedience. However, not all men were disobedient in the Book of Jonah. All people obeyed save Jonah the Prophet!